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FunShift provides Functional shift (divergence) analysis between
the subfamilies of a Protein domain family. The present release
uses Protein Domain families in Pfam (Version 12.0).
Each family was divided into Subfamilies, after
which Rate Shifting Sites (RSS) and Conservation Shifting Sites (CSS)
were identified between each pair of subfamilies containing at least 4
sequences. The RSS and CSS values were used to predict if the function
is shifted between the subfamilies.
This Resource provides:
- Subfamily classification and alignments for each protein domain family.
- Rate Shifting Sites for each pair of Subfamilies.
- Conservation Shifting Sites for each pair of Subfamilies.
- Prediction of Function shift between subfamilies for each pair.
Browse Families:
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